AFITT - Precision ligand fitting to density

BROOD - Local lead hopping with shape and electrostatics

EON - Electrostatic field comparison for molecular similarity

FILTER - Large scale database preparation

FRED - Fast rigid exhaustive docking

OMEGA - The standard for conformer generation

QUACPAC - Protein-ligand charge characterization

ROCS - Shape and chemical similarity in 3D

SMACK - Molecular databases query converter and optimizer (SMARTS and MDL)

SZYBKI - Structure optimization against MMFF94

VIDA & VIVANT - Collaborative visualization and data analysis